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Pacific Northwest National Laboratory (Public)

This Org is intended for the hosting of approved released PNNL software repositories for public use and collaboration.

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  1. neuromancer neuromancer Public

    Pytorch-based framework for solving parametric constrained optimization problems, physics-informed system identification, and parametric model predictive control.

    Python 1.4k 189

  2. HyperNetX HyperNetX Public

    Python package for hypergraph analysis and visualization.

    Python 721 118

  3. OpenCGRA OpenCGRA Public

    OpenCGRA is an open-source framework for modeling, testing, and evaluating CGRAs.

    Verilog 184 28

  4. QASMBench QASMBench Public

    A low-level OpenQASM benchmark suite for NISQ evaluation and simulation. Please see our paper for details.

    OpenQASM 183 52

  5. safekit safekit Public

    Python 144 51

  6. SHAD SHAD Public

    Scalable High-performance Algorithms and Data-structures

    C++ 138 36

Repositories

Showing 10 of 555 repositories
  • PTMdiscoverer Public

    LLM-assisted PTM hypothesis generation from proteomics mass spectrometry data.

    pnnl/PTMdiscoverer's past year of commit activity
    Python 1 BSD-2-Clause 0 1 21 Updated Oct 31, 2026
  • cataverse.ai Public

    autonomous research platform for catalyst discovery

    pnnl/cataverse.ai's past year of commit activity
    Jupyter Notebook 0 0 0 12 Updated Oct 31, 2026
  • spikans Public
    pnnl/spikans's past year of commit activity
    Jupyter Notebook 10 2 0 8 Updated Oct 31, 2026
  • ambrs Public
    pnnl/ambrs's past year of commit activity
    Jupyter Notebook 1 2 1 8 Updated Oct 31, 2026
  • BEM-AI Public
    pnnl/BEM-AI's past year of commit activity
    Python 31 7 4 25 Updated Oct 31, 2026
  • GenrAItOR Public
    pnnl/GenrAItOR's past year of commit activity
    Python 1 BSD-2-Clause 1 1 18 Updated Oct 31, 2026
  • hpgsea Public

    High-performance Gene Set Enrichment Analysis (HPGSEA). Capable of testing gene sets where each gene has an expected direction of change from prior experiments.

    pnnl/hpgsea's past year of commit activity
    R 6 BSD-2-Clause 0 3 0 Updated Oct 31, 2026
  • PermitAI Public

    This GitHub repo contains works under the PermitAI project.

    pnnl/PermitAI's past year of commit activity
    Python 6 2 2 10 Updated Oct 31, 2026
  • comcheckweb-api-python Public

    This repository contains the COMcheckWeb API Python package. It provides tools and scripts for working with the COMcheckWeb API and is intended to be used as a Python package maintained with `uv` for package management.

    pnnl/comcheckweb-api-python's past year of commit activity
    Python 4 BSD-2-Clause 1 2 10 Updated Oct 31, 2026
  • oedisi_dopf Public

    OpenEDI - System Integration (OEDI-SI) - PNNL Distributed Optimal Power Flow (DOPF)

    pnnl/oedisi_dopf's past year of commit activity
    Jupyter Notebook 6 5 3 18 Updated Oct 30, 2026
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